League table
| Pos | Team | Pld | W | D | L | GF | GA | GD | Pts | Qualification or relegation |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Levadia (C) | 28 | 21 | 6 | 1 | 82 | 14 | +68 | 69 | Qualification for Champions League first qualifying round |
| 2 | TVMK | 28 | 19 | 6 | 3 | 89 | 29 | +60 | 63 | Qualification for UEFA Cup first qualifying round |
| 3 | Flora | 28 | 18 | 4 | 6 | 83 | 25 | +58 | 58 | |
| 4 | Narva Trans | 28 | 15 | 2 | 11 | 43 | 39 | +4 | 47 | Qualification for Intertoto Cup first round |
| 5 | Merkuur | 28 | 10 | 5 | 13 | 47 | 58 | −11 | 35 | |
| 6 | Tulevik | 28 | 6 | 7 | 15 | 30 | 53 | −23 | 25 | |
| 7 | Valga | 28 | 5 | 2 | 21 | 30 | 80 | −50 | 17 | |
| 8 | Alutaguse Lootus (R) | 28 | 1 | 2 | 25 | 11 | 117 | −106 | 5 | Qualification for relegation play-offs |
Source: Estonian Football Association (in Estonian)
Rules for classification: 1) points; 2) number of wins; 3) head-to-head points; 4) head-to-head goal difference; 5) head-to-head goals scored; 6) goal difference; 7) number of goals scored.
(C) Champions; (R) Relegated
Rules for classification: 1) points; 2) number of wins; 3) head-to-head points; 4) head-to-head goal difference; 5) head-to-head goals scored; 6) goal difference; 7) number of goals scored.
(C) Champions; (R) Relegated
Relegation play-off
| Tallinna Dünamo | 1–2 | Alutaguse Lootus |
|---|---|---|
Butajev  44' |
Popov 30' Ametov 90+3' |
| Alutaguse Lootus | 0–4 | Tallinna Dünamo |
|---|---|---|
| Tšernoussov 8' Krivošein 32' Butajev 65'Semko 76' |
Tallinna Dünamo won 5-2 on aggregate and were promoted for the 2005 Meistriliiga. Alutaguse Lootus were relegated to the 2005 Esiliiga.
