The 2006 Indonesia Open in badminton was held in Jakarta, from May 31 to June 4, 2006. It was a six-star tournament and the prize money was US$250,000.
| Category | Winners | Runners-up | Score |
|---|---|---|---|
| Men's singles |  Taufik Hidayat
|
 Bao Chunlai
|
21–18, 21–17 |
| Women's singles | Zhu Lin
|
Lu Lan
|
21–11, 21–16 |
| Men's doubles |  Tony Gunawan & Candra Wijaya
|
Markis Kido & Hendra Setiawan
|
21–11, 21–16 |
| Women's doubles | Wei Yili & Zhang Yawen
|
Yang Wei & Zhang Jiewen
|
21–13, 21–13 |
| Mixed doubles | Xie Zhongbo & Zhang Yawen
|
Nova Widianto & Liliyana Natsir
|
21–19, 21–15 |
| Quarterfinals | Semifinals | Finals | ||||||||||||||||||
| 9/16 | Chen Yu
| 21 | 19 | 21 | ||||||||||||||||
| 9/16 |  Eric Pang
| 11 | 21 | 15 | ||||||||||||||||
| Chen Yu
| 21 | 17 | 16 | |||||||||||||||||
| Taufik Hidayat
| 19 | 21 | 21 | |||||||||||||||||
| 3/4 |  Kenneth Jonassen
| 19 | 19 | |||||||||||||||||
| 5/8 | Taufik Hidayat
| 21 | 21 | |||||||||||||||||
| Taufik Hidayat
| 21 | 21 | ||||||||||||||||||
| Bao Chunlai
| 18 | 19 | ||||||||||||||||||
| 9/16 | Simon Santoso
| 11 | 21 | 20 | ||||||||||||||||
| 3/4 | Bao Chunlai
| 21 | 13 | 22 | ||||||||||||||||
| Bao Chunlai
| 21 | 21 | ||||||||||||||||||
| Qiu Yanbo
| 16 | 13 | ||||||||||||||||||
| Qiu Yanbo
| wo | wo | ||||||||||||||||||
| 2 |  Lee Hyun-il
| |||||||||||||||||||