RAB4A

Available structures

Ortholog search: PDBe RCSB

List of PDB id codes
1YU9, 1Z0K, 2BMD, 2BME

Identifiers

Aliases

RAB4A, HRES-1, HRES-1/RAB4, HRES1, RAB4, member RAS oncogene family

External IDs

OMIM: 179511 MGI: 105069 HomoloGene: 101538 GeneCards: RAB4A

Gene location (Human)

Chr.	Chromosome 1 (human)^[1]

Band	1q42.13	Start	229,271,062 bp^[1]
Band	1q42.13	End	229,305,894 bp^[1]

Gene location (Mouse)

Chr.	Chromosome 8 (mouse)^[2]

Band	8 E2\|8 72.19 cM	Start	124,532,724 bp^[2]
Band	8 E2\|8 72.19 cM	End	124,562,026 bp^[2]

RNA expression pattern

Bgee

Human

Mouse (ortholog)

Top expressed in

parotid gland

palpebral conjunctiva

human penis

right ventricle

endothelial cell

Achilles tendon

pons

amniotic fluid

internal globus pallidus

subthalamic nucleus

Top expressed in

parotid gland

seminal vesicula

lacrimal gland

yolk sac

submandibular gland

ascending aorta

cerebellar cortex

left lobe of liver

duodenum

supraoptic nucleus

More reference expression data

BioGPS

n/a

Gene ontology
Molecular function	nucleotide binding GDP binding ATPase binding GTP binding protein binding GTPase activity ATPase activator activity syntaxin binding ionotropic glutamate receptor binding
Cellular component	cytoplasm recycling endosome vesicle cytosol endosome membrane intracellular membrane-bounded organelle insulin-responsive compartment plasma membrane perinuclear region of cytoplasm extracellular exosome cytoplasmic vesicle membrane postsynaptic recycling endosome early endosome membrane recycling endosome membrane anchored component of synaptic vesicle membrane
Biological process	regulation of endocytosis antigen processing and presentation positive regulation of ATP-dependent activity Rab protein signal transduction protein transport phosphatidylinositol biosynthetic process intracellular protein transport small GTPase mediated signal transduction
Sources:Amigo / QuickGO

Orthologs

Species

Human

Mouse

Entrez


5867


19341

Ensembl


ENSG00000168118


ENSMUSG00000019478

UniProt


P20338


P56371

RefSeq (mRNA)


NM_001271998 NM_004578


NM_009003

RefSeq (protein)


NP_001258927 NP_004569 NP_004569.2


NP_033029

Location (UCSC)

Chr 1: 229.27 – 229.31 Mb

Chr 8: 124.53 – 124.56 Mb

PubMed search

^[3]

^[4]

Wikidata

View/Edit Human

View/Edit Mouse

Ras-related protein Rab-4A is a protein that in humans is encoded by the RAB4A gene.^[5]

Interactions

RAB4A has been shown to interact with:

References

Stibbs HH, Seed JR (Apr 1975). "Short-term metabolism of (14-C) tryptophan in rats infected with Trypanosoma brucei gambiense". The Journal of Infectious Diseases. 131 (4): 459–62. doi:10.1093/infdis/131.4.459. PMID 1117200.
van der Sluijs P, Hull M, Huber LA, Mâle P, Goud B, Mellman I (Dec 1992). "Reversible phosphorylation--dephosphorylation determines the localization of rab4 during the cell cycle". The EMBO Journal. 11 (12): 4379–89. doi:10.1002/j.1460-2075.1992.tb05538.x. PMC 557012. PMID 1425574.
Bailly E, McCaffrey M, Touchot N, Zahraoui A, Goud B, Bornens M (Apr 1991). "Phosphorylation of two small GTP-binding proteins of the Rab family by p34cdc2". Nature. 350 (6320): 715–8. doi:10.1038/350715a0. PMID 1902553. S2CID 4261640.
Rousseau-Merck MF, Zahraoui A, Touchot N, Tavitian A, Berger R (Feb 1991). "Chromosome assignment of four RAS-related RAB genes". Human Genetics. 86 (4): 350–4. doi:10.1007/BF00201831. PMID 1999336. S2CID 30730416.
Zahraoui A, Touchot N, Chardin P, Tavitian A (Jul 1989). "The human Rab genes encode a family of GTP-binding proteins related to yeast YPT1 and SEC4 products involved in secretion". The Journal of Biological Chemistry. 264 (21): 12394–401. doi:10.1016/S0021-9258(18)63872-4. PMID 2501306.
Cormont M, Tanti JF, Zahraoui A, Van Obberghen E, Le Marchand-Brustel Y (Feb 1994). "Rab4 is phosphorylated by the insulin-activated extracellular-signal-regulated kinase ERK1". European Journal of Biochemistry. 219 (3): 1081–5. doi:10.1111/j.1432-1033.1994.tb18591.x. PMID 8112321.
Maruyama K, Sugano S (Jan 1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
Karniguian A, Zahraoui A, Tavitian A (Aug 1993). "Identification of small GTP-binding rab proteins in human platelets: thrombin-induced phosphorylation of rab3B, rab6, and rab8 proteins". Proceedings of the National Academy of Sciences of the United States of America. 90 (16): 7647–51. Bibcode:1993PNAS...90.7647K. doi:10.1073/pnas.90.16.7647. PMC 47199. PMID 8356066.
Valentijn JA, LaCivita DQ, Gumkowski FD, Jamieson JD (Jan 1997). "Rab4 associates with the actin terminal web in developing rat pancreatic acinar cells". European Journal of Cell Biology. 72 (1): 1–8. PMID 9013719.
Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S (Oct 1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
Vitale G, Rybin V, Christoforidis S, Thornqvist P, McCaffrey M, Stenmark H, Zerial M (Apr 1998). "Distinct Rab-binding domains mediate the interaction of Rabaptin-5 with GTP-bound Rab4 and Rab5". The EMBO Journal. 17 (7): 1941–51. doi:10.1093/emboj/17.7.1941. PMC 1170540. PMID 9524117.
Bucci C, Chiariello M, Lattero D, Maiorano M, Bruni CB (May 1999). "Interaction cloning and characterization of the cDNA encoding the human prenylated rab acceptor (PRA1)". Biochemical and Biophysical Research Communications. 258 (3): 657–62. doi:10.1006/bbrc.1999.0651. PMID 10329441.
Shisheva A, Chinni SR, DeMarco C (Sep 1999). "General role of GDP dissociation inhibitor 2 in membrane release of Rab proteins: modulations of its functional interactions by in vitro and in vivo structural modifications". Biochemistry. 38 (36): 11711–21. doi:10.1021/bi990200r. PMID 10512627.
Nagelkerken B, Van Anken E, Van Raak M, Gerez L, Mohrmann K, Van Uden N, Holthuizen J, Pelkmans L, Van Der Sluijs P (Mar 2000). "Rabaptin4, a novel effector of the small GTPase rab4a, is recruited to perinuclear recycling vesicles". The Biochemical Journal. 346 (3): 593–601. doi:10.1042/0264-6021:3460593. PMC 1220890. PMID 10698684.
Gerez L, Mohrmann K, van Raak M, Jongeneelen M, Zhou XZ, Lu KP, van Der Sluijs P (Jul 2000). "Accumulation of rab4GTP in the cytoplasm and association with the peptidyl-prolyl isomerase pin1 during mitosis". Molecular Biology of the Cell. 11 (7): 2201–11. doi:10.1091/mbc.11.7.2201. PMC 14913. PMID 10888662.
Li L, Omata W, Kojima I, Shibata H (Feb 2001). "Direct interaction of Rab4 with syntaxin 4". The Journal of Biological Chemistry. 276 (7): 5265–73. doi:10.1074/jbc.M003883200. PMID 11063739.
Hartley JL, Temple GF, Brasch MA (Nov 2000). "DNA cloning using in vitro site-specific recombination". Genome Research. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
Cormont M, Mari M, Galmiche A, Hofman P, Le Marchand-Brustel Y (Feb 2001). "A FYVE-finger-containing protein, Rabip4, is a Rab4 effector involved in early endosomal traffic". Proceedings of the National Academy of Sciences of the United States of America. 98 (4): 1637–42. doi:10.1073/pnas.031586998. PMC 29309. PMID 11172003.
Bielli A, Thörnqvist PO, Hendrick AG, Finn R, Fitzgerald K, McCaffrey MW (Mar 2001). "The small GTPase Rab4A interacts with the central region of cytoplasmic dynein light intermediate chain-1". Biochemical and Biophysical Research Communications. 281 (5): 1141–53. doi:10.1006/bbrc.2001.4468. PMID 11243854.
Simpson JC, Wellenreuther R, Poustka A, Pepperkok R, Wiemann S (Sep 2000). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Reports. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.

v t e PDB gallery
1yu9: GppNHp-Bound Rab4A 1z0k: Structure of GTP-Bound Rab4Q67L GTPase in complex with the central Rab binding domain of Rabenosyn-5 2bmd: HIGH RESOLUTION STRUCTURE OF GDP-BOUND HUMAN RAB4A 2bme: HIGH RESOLUTION STRUCTURE OF GPPNHP-BOUND HUMAN RAB4A

Interactions

References

Further reading