Cladograms[edit]

ARB Silva Living Tree The Arb-Silva living tree project has the aim of creating a phylogram containing each validly published 16S and 23S sequence: currently there are over 8,500 species on the tree. The tree was created by ML without bootstrap: consequently accuracy is traded off for size and many phylum level clades are not correctly resolved (such as the Firmicutes).[1][2]

"Neomura"

Domain Archaea (Eukaryotes not present in analysis)

Domain Bacteria

Thermotogae

Thermodesulfobiaceae

Incertae sedis XV (Firmicutes)

Dictyoglomaceae

Thermoanaerobacterales subclade (Firmicutes)

Thermoanaerobacterales subclade

Aquificae

Thermodesulfobacteria

Thermoanaerobacterales subclade

Elusimicrobium

Caldisericum

Thermoanaerobacterales subclade

Firmicutes (subclade)

Halobacteroidaceae

Halanaerobiaceae

Cyanobacteria

Vampirovibrio (delta)

Thermoaerobacter (Firmicutes)

Chloroflexi

Actinobacteria

Planctomycetes

Chlamydiae

Lentisphaerae

Verrucomicrobia

Gemmatimonas

Fibrobacteres

Deferribacteriales

Ignavibacteriaceae

Chlorobi

Bacteroidetes

Deinococcus-thermus

Syntrophorhabdus

Nitrospira

Epsilonproteobacteria

Deltaproteobacteria

Chrysiogenetes

Deferribacteres

Acidobacteria

Spirochaetes

Zetaproteobacteria (singleton clade: Mariprofundus ferrooxydans)

Alphaproteobacteria

Gammaproteobacteria

Betaproteobacteria

-- fgTC 06:31, 22 October 2011 (UTC)Reply[reply]

  • I think that if content seems to be too large for a single article, then it is much better to split out than to 'hide' out in scrollable or collapsible boxes. The branching order section looks like a perfect candidate to become a Bacterial phyla branching order article (or whatever name is appropriate, I do not know). By the way, the section Overview of phyla needs expansion - some of its sections are simply threefold repetitions of the title 6.13 Dictyoglomi // Main article: Dictyoglomi // Dictyoglomi, many have litle more. And looks like another good candidate for splitting and eventualy merging in the smaller of the 'main articles'). - Nabla (talk) 11:48, 24 October 2011 (UTC)Reply[reply]

References

  1. ^ Yarza, Pablo; Ludwig, Wolfgang; Euzéby, Jean; Amann, Rudolf; Schleifer, Karl-Heinz; Glöckner, Frank Oliver; Rosselló-Móra, Ramon (2010). "Update of the All-Species Living Tree Project based on 16S and 23S rRNA sequence analyses". Systematic and Applied Microbiology. 33 (6): 291–299. doi:10.1016/j.syapm.2010.08.001. PMID 20817437. ((cite journal)): Text "20817437" ignored (help)
  2. ^ Yarza, P.; Richter, M.; Peplies, J. R.; Euzeby, J.; Amann, R.; Schleifer, K. H.; Ludwig, W.; Glöckner, F. O.; Rosselló-Móra, R. (2008). "The All-Species Living Tree project: A 16S rRNA-based phylogenetic tree of all sequenced type strains". Systematic and Applied Microbiology. 31 (4): 241–250. doi:10.1016/j.syapm.2008.07.001. PMID 18692976.

Outdated "As of" tag[edit]

Hello! In the lede, there's a statement marked as outdated:

"Therefore, the number of major phyla has increased from 12 identifiable lineages in 1987, to 52 as of 2003.[8]"

Does anyone have an updated number? Or could we restructure the paragraph so that it isn't phrased like this? For instance the previous sentence says currently 52+, could we leave it at that? Thanks! Ajpolino (talk) 01:25, 15 January 2016 (UTC)Reply[reply]

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Rename to List of bacterial phyla?[edit]

The following discussion is closed. Please do not modify it. Subsequent comments should be made on the appropriate discussion page. No further edits should be made to this discussion.


I'm wondering if this article would be better described by the title List of bacterial phyla, since that seems to be what it predominantly is. This would fit with List of bacterial orders and List of bacteria genera. Thoughts? Ajpolino (talk) 23:11, 1 February 2018 (UTC)Reply[reply]

@Chiswick Chap, Ninjatacoshell, and Squidonius: pinging major contributors. Ajpolino (talk) 23:11, 1 February 2018 (UTC) Reply[reply]
No, we certainly don't want two articles. Just a simple change of title to say it's a list. Chiswick Chap (talk) 12:08, 4 February 2018 (UTC)Reply[reply]
The discussion above is closed. Please do not modify it. Subsequent comments should be made on the appropriate discussion page. No further edits should be made to this discussion.

CPR membership[edit]

Are Saccharibacteria and Peregrinibacteria members of CPR or not? Phylogenetic tree says yes, table says no, Saccharibacteria says close relatives are Chloroflexi, but in phylogenetic tree there(!) Chloroflexi are just used as outgroup to root the tree. And the taxobox there says Saccharibacteria are CPR.--Ernsts (talk) 22:17, 22 October 2020 (UTC)Reply[reply]